In the context of specialized cell structure, which of the following is the closest analogy

In the context of specialized cell structure, which of the following is the closest analogy

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In the context of specialized cell structure, which of the following is the closest analogy

Highlights

Depolarization of MECII neurons produces remapping in CA1 and impairs spatial memory

Hyperpolarization of a similar number of MECII neurons produces neither

Both manipulations change the firing rate, but not firing location, of MEC neurons

Depolarization of MECII differentially changes firing rates of individual grid fields

Summary

The spatial receptive fields of neurons in medial entorhinal cortex layer II (MECII) and in the hippocampus suggest general and environment-specific maps of space, respectively. However, the relationship between these receptive fields remains unclear. We reversibly manipulated the activity of MECII neurons via chemogenetic receptors and compared the changes in downstream hippocampal place cells to those of neurons in MEC. Depolarization of MECII impaired spatial memory and elicited drastic changes in CA1 place cells in a familiar environment, similar to those seen during remapping between distinct environments, while hyperpolarization did not. In contrast, both manipulations altered the firing rate of MEC neurons without changing their firing locations. Interestingly, only depolarization caused significant changes in the relative firing rates of individual grid fields, reconfiguring the spatial input from MEC. This suggests a novel mechanism of hippocampal remapping whereby rate changes in MEC neurons lead to locational changes of hippocampal place fields.

Keywords

place cells

grid cells

remapping

hippocampus

medial entorhinal cortex

spatial memory

chemogenetic

transgenic

Cited by (0)

© 2017 Elsevier Inc.

The Electroencephalogram—A Brief Background

Leif Sörnmo, Pablo Laguna, in Bioelectrical Signal Processing in Cardiac and Neurological Applications, 2005

2.1.1 Neurons

The basic functional unit of the nervous system is the nerve cell—the neuron—which communicates information to and from the brain. All nerve cells are collectively referred to as neurons although their size, shape, and functionality may differ widely. Neurons can be classified with reference to morphology or functionality. Using the latter classification scheme, three types of neurons can be defined: sensory neurons, connected to sensory receptors, motor neurons, connected to muscles, and interneurons, connected to other neurons.

The archetypal neuron consists of a cell body, the soma, from which two types of structures extend: the dendrites and the axon, see Figure 2.1.(a). Dendrites can consist of as many as several thousands of branches, with each branch receiving a signal from another neuron. The axon is usually a single branch which transmits the output signal of the neuron to various parts of the nervous system. The length of an axon ranges from less than 1 mm to longer than 1 m; the longer axons are those which run from the spinal cord to the feet. Dendrites are rarely longer than 2 mm.

In the context of specialized cell structure, which of the following is the closest analogy

Figure 2.1. (a) An archetypal neuron and (b) three interconnected neurons. A presynaptic neuron transmits the signal toward a synapse, whereas a postsynaptic neuron transmits the signal away from the synapse.

The transmission of information from one neuron to another takes place at the synapse, a junction where the terminal part of the axon contacts another neuron. The signal, initiated in the soma, propagates through the axon encoded as a short, pulse-shaped waveform, i.e., the action potential. Although this signal is initially electrical, it is converted in the presynaptic neuron to a chemical signal (“neurotransmitter”) which diffuses across the synaptic gap and is subsequently reconverted to an electrical signal in the postsynaptic neuron, see Figure 2.1.(b).

Summation of the many signals received from the synaptic inputs is performed in the postsynaptic neuron. The amplitude of the summed signal depends on the total number of input signals and how closely these signals occur in time; the amplitude decreases when the signals become increasingly dispersed in time. The amplitude of the summed signal must exceed a certain threshold in order to make the neuron fire an action potential. Not all neurons contribute, however, to the excitation of the postsynaptic neuron; inhibitory effects can also take place due to a particular chemical structure associated with certain neurons. A postsynaptic neuron thus receives signals which are both excitatory and inhibitory, and its output depends on how the input signals are summed together. This input/output operation is said to represent one neural computation and is performed repeatedly in billions of neurons.

In contrast to the electrical activity measured on the scalp, electrical activity propagating along the axon is manifested as a series of action potentials, all waveforms having identical amplitudes. This remarkable feature is explained by the “on/off” property of the neuron which states that an action potential is either elicited with a fixed amplitude or does not occur at all. The intensity of the input signals is instead modulated by the firing rate of the action potentials. For example, this signal property implies that a high firing rate in sensory neurons is associated with considerable pain or, in motor neurons, with a powerful muscle contraction. Furthermore, it is fascinating to realize that this modulation system is particularly well-suited for transmission of information over long distances and is tolerant to local failures. The upper bound of the firing rate is related to the refractory period of the neuron, i.e., the time interval during which the neuron is electrically insensitive.

Neurons are, of course, not working in splendid isolation, but are interconnected into different circuits (“neural networks”), and each circuit is tailored to process a specific type of information. A well-known example of a neural circuit is the knee-jerk reflex. This particular circuit is activated by muscle receptors which, by a hammer tap, initiate a signal that travels along an afferent pathway. The received sensory information stimulates motor neurons through synaptic contacts, and a new signal is generated which travels peripherally back, giving rise to muscle contraction and the associated knee-jerk response.

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Insights on nervous system biology and anatomy

Madalena Esteves, ... Hugo Leite-Almeida, in Handbook of Innovations in Central Nervous System Regenerative Medicine, 2020

1.4 Cells of the nervous system

There are two main cell types in the nervous system: neurons and supporting cells. While the neuron is the main functional unit, the remaining cells (glial and ependymal) have been classically viewed as secondary, mainly supporting neuronal function. However, new data has shown that this neuron-glial interaction is far more complex. The idea that neurons and glia coexist in a 1:10 relation has been highly propelled in the literature but it is now clear that they exist in similar proportions [135].

1.4.1 Neurons

Neurons (as well as astrocytes, oligodendrocytes, and ependymal cells) derive from the cytodifferentiation of the neuroepithelium lining the neural tube. The process starts after the fusion of the neural folds and proceeds cranially and caudally as the tube zips up. Neurogenesis initiation precedes gliogenesis [92,136] and can persist through adult life in specific neurogenic niches, including the hippocampal dentate gyrus and the subventricular zone [137–139]. New neurons then migrate, differentiate, and establish synapses integrating networks [92].

A neuron’s main function is to receive, integrate, and transmit information to other cells. Neurons possess a cell body (soma) from which two types of processes (neurites) emerge: dendrites, which are specialized in receiving input from other cells or the environment, and an axon, a long projection of the cell body that sends information to other neurons, muscles, or glands; it often branches away from the soma into multiple collaterals, which possess presynaptic boutons. Neurons are classified into three major types according to the type of branching in multipolar, bipolar, and pseudounipolar. Multipolar are the most common presenting multiple dendrites and single axon, which arise directly from the soma. Such is the case of cortical pyramidal cells. Bipolar cells, on the other hand, possess two processes, one dendrite and one axon, which later branch away from the soma. These occur in afferent pathways of visual, auditory, and vestibular systems. Finally, pseudounipolar cells possess a single neurite, which branches into dendritic and axonal branches and are primary afferents of the spinal cord and cranial nerves. Unipolar neurons also exist in invertebrates. Functionally, neurons are also classified in interneurons or projection neurons if projecting within the local circuitry or to distant regions, respectively. They can also be classified based on their neurotransmitter content (e.g., dopaminergic neurons) [59].

Neurons are electrically excitable. At rest, the membrane potential is around −70 mV. When the neuron membrane is depolarized to a certain level, an action potential occurs that can be conducted through the axon [140], inducing release of neurotransmitters at the synaptic terminal. These neurotransmitters diffuse through the synaptic gap, reaching receptors in the postsynaptic cell, changing its membrane potential, and potentially reinitiating the cycle in the postsynaptic neuron.

1.4.2 Glial cells

1.4.2.1 Oligodendrocytes and Schwann cells

Oligodendrocytes (CNS) and Schwann cells (PNS) are the cells that produce the myelin sheath, which coats many axons thereby facilitating current conduction [59]. In the periphery, one Schwann cell wraps around a segment of the axon while in the CNS, oligodendrocyte possesses multiple processes, each being able to myelinate segments (up to about 1 mm)—internodal segments—of multiple axons. Thus, each (myelinated) axon, is covered with multiple myelin sheaths, at which no ionic exchanges occur, and voltage currents spread passively. These regions are separated by small uninsulated gaps, the nodes of Ranvier, enriched in ionic channels that can propagate the action potential from the previous node. This so-called saltatory conduction accelerates the propagation of the action potential. Nodes of Ranvier are larger in the CNS further increasing conduction efficiency. Oligodendrocytes and Schwann cells also differ in the proteins present in the myelin sheaths, for example, myelin oligodendrocyte glycoprotein (CNS), and P0 and P22 (PNS), and that are essential for its integrity. Demyelinating diseases like multiple sclerosis affect the conduction ability of the neurons leading to neurological deficits. For in-depth information, consult, for instance [141–143].

1.4.2.2 Astrocytes

Astrocytes are star-shaped cells and are the largest neuroglial cells. Two main types of astrocyte are recognized: protoplasmic and fibrous. They differ in their relative abundance—the former being more prevalent in the gray matter and the latter in the white matter—and morphology—protoplasmic present numerous, short branching processes while fibrous have fewer and simpler processes. Astrocytes have diverse functions in the CNS. As stated earlier, they provide scaffolds to assist neurons migration during development in embryonic development (see Section 1.3.2.5.1). Also, they are an important component of the blood-brain barrier, ensheathing capillary vessels with expansions of their processes; perivascular feet cover most outer surface of the capillaries. Astrocytes participate in the exchange of metabolites between the blood and brain having a role in the metabolism and homeostatic regulation CNS microenvironment. Importantly, they are part of what has been called the “tripartite synapses,” where they are able to sense neuronal activity, elevate Ca2+, and release neurotransmitters and other effectors, playing an active modulatory role in synaptic transmission. Such has been shown to be relevant for behavior and cognition [144] (see also [145–148]).

1.4.2.3 Microglia

Microglia are the immune cells of the CNS, responsible for vigilance and protection from infection and lesion. In opposition to the remaining glial cells, which derive from the neural tube (see Section 1.4.1), microglial cell progenitors arise from the yolk sac and colonize the CNS before the blood-brain barrier is formed. In a physiological state, microglia are typically in a “surveillance state,” exhibiting a small soma and long ramified processes, which are permanently moving and scouting the environment. Upon stimulation, these cells become reactive (phagocytic), proliferative, and mobile. Their branches retract, and they actively migrate to the lesion/infection site [149].

1.4.3 Ependymal cells

The ependyma is a ciliated epithelium located in the ventricular walls. In the adult CNS, their functions include support of the subventricular zone, barrier functions, and CSF production and movement induction. Thus, these cells play a role in neurogenesis, and in regulating the influx, outflux and movement of the CSF [150].

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URL: https://www.sciencedirect.com/science/article/pii/B9780128180846000015

Introduction to Cognitive Science, Cognitive Computing, and Human Cognitive relation to help in the solution of Artificial Intelligence Biomedical Engineering problems

Jorge Garza-Ulloa, in Applied Biomedical Engineering Using Artificial Intelligence and Cognitive Models, 2022

2.3.1 Neurons and cognition

The “neuron” is a specialized “cell” known as the basic unit of the “nervous system.” A typical neuron consists of a “dendrite,” a cell body known as the “soma,” “axon hillock,” “axon,” and “axon terminals,” as shown at the top of Fig. 1.6A. A “type I synapse provides an excitatory connection” between one “axon terminal” of a neuron to the “dendrite” of another neuron. The other “type II inhibitory connection of synapses” is typically located on a cell body. The cell that sends out information is called a “presynaptic neuron,” and the cell that receives information is known as a “postsynaptic neuron” [3], as shown in Fig. 2.2A. It is important to mention that there are more specialized types and subtypes of “neurons” that form an extensive “neuron taxonomy”; a good resource is the digital database that can be found on the website “NeuroMorpho.org[12]. One practical reason is that the differences between them could explain why certain diseases only harm a certain population of “neurons” [13]. The “neuron’s function” is based on two kinds of activities: “electrical” and “chemical.”

In the context of specialized cell structure, which of the following is the closest analogy

Figure 2.2. (A) Two neurons joined by type I excitatory synapse, and some major neurotransmitters released during the process. (B) The three major regions and some of their components in the brain: forebrain, midbrain, and hindbrain.

“Electrical activity is used to transmit signals within neurons.” “Neurons” employ electrical signals to relay information from one part of the neuron to another. “Within a single neuron, information is conducted via electrical signaling.” When a “neuron” is stimulated, an electrical impulse, called the “action potential,” moves along the “neuron axon,” which is a long threadlike part of a nerve. The “action potential” enables signals to travel very rapidly along the “neuron.”

“Chemical activity is used to transmit signals between neurons through a small gap that separates neurons, known as synapse,” as shown in Fig. 2.2A. These trigger the release of “neurotransmitters” which carry the impulse across the “synapse to the next neuron.” Once a nerve impulse has triggered the release of “neurotransmitters,” these “chemical messengers” cross the tiny “synaptic gap” and are taken up by specialized receptors on the surface of the next cell, as indicated at the bottom of Fig. 2.2A. This process converts the chemical signal back into an electrical signal. If the signal is strong enough, it will be propagated down to the next neuron by an “action potential” until once again it reaches a “synapse” and the process is repeated once more.

“Synapse”s are located throughout the “brain” and “nervous system” and refer to the junction between two neurons. They behave as a sort of “relay station” where a message in the form of a chemical “neurotransmitter” is passed from one “neuron or nerve fiber” to the next, or between the “neuron and the muscle or gland” the message is aimed at. On average, each “neuron has around 1000 synapses and depending on its type can have from just one to more than 1000 synapses.”

“Neurotransmitters” are chemicals that transmit signals from a “neuron” to a “target cell” across a “synapse.” There are different types of these small molecules manufactured in different kinds of “axon terminals.” The major classes of them include “amino acids,” “peptides,” and “monoamines.” Some important “neurotransmitters” are shown in Fig. 2.2A: “acetylcholine,” “dopamine,” “serotonin,” “gamma-aminobutyric acid,” “glutamate,” “epinephrine or adrenaline and norepinephrine,” “endorphins,” and others. The specific function of each “neurotransmitter” is as follows:

“Acetylcholine (Ach)” is used by the “CNS” and “PNS” to cause muscle contraction, and many “neurons in the brain to regulate memory.” In most instances, “Ach” has an “excitatory function,” and it is one of many “neurotransmitters” in the “autonomic nervous system,” and the only “neurotransmitter” used in the motor division of the “somatic nervous system.”

“Dopamine (DA)” is produced in few areas of the brain, including the “substantia nigra” and the “ventral tegmental area,” which is a group of “neurons” located close to the midline on the floor of the “midbrain” or “mesencephalon,” as indicated in Fig. 2.2B. “DA” is also a “neurohormone” released by the “hypothalamus,” and it has important roles in “behavior and cognition, voluntary movement, motivation, punishment and reward, sleep, mood, attention, working memory, and learning.”

“Serotonin (5-HT)” is a monoamine “neurotransmitter,” usually found in the “gastrointestinal tract,” “platelets,” and the “CNS.” This chemical is also known as the “happiness hormone,” because it arouses feelings of pleasure and well-being. “Low levels of serotonin are associated with increased carbohydrate cravings, depression or other mood symptoms, sensory perceptions, sleep deprivation, and hypersensitivity to pain.”

“Gamma-aminobutyric acid (GABA)” is the major inhibitory “neurotransmitter” in the brain. It is important in producing sleep, reducing anxiety, and forming memory. “The primary role of GABA is to slow down neuron activity.”

“Glutamate (Glu)” is the most abundant excitatory neurotransmitter in the vertebrate nervous system. “Glu is also the major excitatory transmitter in the brain, and the major mediator of excitatory signals in the mammalian central nervous system. It is involved in most aspects of normal brain function, including cognition, memory, and learning.”

“Epinephrine or adrenaline (Epi) and norepinephrine (NE),” these are separate but related hormones secreted by the medulla of the “adrenal glands.” These chemicals are also produced at the ends of sympathetic nerve fibers, where “they serve as chemical mediators for conveying the nerve impulses to effector organs. They are responsible for concentration, attention, mood, and both physical and mental arousal.”

“Endorphins” are produced by the “pituitary gland” and the “hypothalamus” in vertebrates during exercise, excitement, pain, consumption of spicy food, love, and orgasm. “Endorphins contribute to the feeling of well-being and act similarly to opiates. They are also known to reduce pain and anxiety.”

“We can deduce that any malfunction of synapses affects the creation and transition of neurotransmitters’ effects, as it can affect the order sent by the brain leading to many cognitive alterations. They are reflected as multiple symptoms in neurologic disorders” [14].

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URL: https://www.sciencedirect.com/science/article/pii/B9780128207185000076

Nerve Conduction

Joseph Feher, in Quantitative Human Physiology, 2012

1.

Renshaw (J. Neurophys. 3:373–387, 1940) provided an ingenious method for estimating the time of synaptic delay in the spinal cord. He stimulated the intermediate gray of the spinal cord with successively larger stimuli and recorded the output of the ventral root. A schematic of his experimental set-up and results are shown in Figure 4.PS1.1. Recordings were performed using extracellular electrodes. A postulated schematic of the neuronal “wiring diagram” is provided to help you think about this. With successively larger stimuli, more and more of the cord interneurons, and eventually the motoneurons, were excited, as indicated by the dashed lines in the neuronal wiring diagram.

A.

Explain the origins of peaks S, T, and M in the record.

B.

Why does S decline as M increase?

C.

Estimate the synaptic delay from the traces.

In the context of specialized cell structure, which of the following is the closest analogy

Figure 4.PS1.1.

2.

Renshaw also set up the experiment shown in Figure 4.PS1.2, in which the dorsal root was stimulated weakly (which stimulates the Ia afferents) and the resulting electrical activity was recorded in the dorsal root entry zone and in the ventral root. The results are shown at the top right of the figure, where Ra represents the afferent root (sensory) and Re indicates the efferent root (motor). Explain how this result, coupled with that of problem 1, allowed Renshaw to conclude that the Ia afferent reflex was monosynaptic.

In the context of specialized cell structure, which of the following is the closest analogy

Figure 4.PS1.2.

3.

The Hoffman reflex refers to the reflex contraction of a muscle caused by stimulation of the nerve. The experimental set-up is shown in Figure 4.PS1.3. The muscle contraction is monitored by electromyography (EMG). An example of the EMG response is given. The Ia fibers in the nerve have a lower threshold for activation than do the motor axons, and so the EMG recording depends on the magnitude of the stimulus. At low stimulus strengths a pure H-reflex is recorded, with no M-wave. As the strength of stimulus increases, motor axons supplying the muscle are excited and two distinct responses are recorded, the H-reflex and the M-wave. As the stimulus strength increases still further, the H-reflex progressively is extinguished. From the “wiring diagram”, deduce why the H-wave disappears at high stimulus strength. Hint: stimulation of a nerve in its middle conducts orthodromically (toward its normal terminal) and antidromically—in the opposite direction toward the cell body.

In the context of specialized cell structure, which of the following is the closest analogy

Figure 4.PS1.3.

4.

The International Olympic Committee has approached you for help in making sprint races fair. In these races, sprinters are started by three commands: “On your marks,” “Get set,” and “Blam!” A blank pistol report starts the runners. Winners of these races are often determined by a scant hundredth of a second, or 10 ms, over the course of 100 m. The slightest advantage by a sprinter can mean victory. If a sprinter anticipates the gun, just slightly, he can win the race. In an unfair race, when a runner starts before the gun, the race is stopped by a second blank pistol report. The field is allowed one false start, and the next false start results in the disqualification of the runner who first begins. The IOC wants an automatic determination of when a false start occurs, and their question to you is: what is the minimum reaction time for a sprinter to come off the blocks after hearing the pistol report? How would you determine this reaction time? Knowing what you do about the pathways involved, synaptic delays, and propagation velocities, estimate the minimum reaction time.

5.

Estimate the time of diffusion for a neurotransmitter across a 100-nm synaptic gap using the equations developed in Chapter 1.6.

6.

A typical standard for military hikes is about 4 miles per hour with 30 in. strides. This is not double-time, but it is a rigorous pace. It may not seem like much, but it is harder than it sounds.

A.

Estimate the frequency of foot strikes.

B.

The definition of walking as opposed to running is that there is always contact with the ground. Estimate the duty cycle (the fraction of time that is active) for the gastrocnemius muscle (the calf muscle) during the hike.

C.

Based on your answer to 6A and 6B, what do you suppose the action potential train to the gastrocnemius muscle looks like?

7.

Suppose that a vesicle 100 nm in external diameter, with 10 nm wall thickness, contains 10,000 molecules of neurotransmitter. It dumps its neurotransmitter into a cleft 50 nm wide and 500 nm in diameter.

A.

What is the concentration, in molar, of neurotransmitter inside the synaptic vesicle?

B.

What is the concentration, in molar, of neurotransmitter in the synaptic cleft assuming that it becomes evenly distributed and there is no degradation?

8.

When you roll down a long hill, and then try to stand immediately upon reaching the bottom, you discover that you are dizzy. Why?

9.

You are seated on a rotating chair, and your pals quickly rotate you to your right for about 20 s, and then stop you. They get a chuckle out of watching your eyes move slowly to one side and then being rapidly reset, a condition called nystagmus (from the Greek “nod” because it resembles the nod when one falls asleep, the slow phase as the head drops and a quick phase as it is snapped back to an erect position). The slow phase is part of the vestibulo-ocular reflex and brain stem circuits generate the quick phase. What causes this slow phase, and in what direction does it occur?

10.

A diagram of the dermatomes is shown in Figure 4.PS1.4. These are areas of the skin that are innervated by the indicated spinal nerves. The myotomes are muscles that generally lie under the corresponding dermatomes.

A.

Your friend took a nasty spill playing intramural soccer and now complains of loss of sensation in his left shoulder. What might cause this?

B.

Another friend noticed the other day that his left foot sort of flaps along when he walks and he has trouble lifting the foot and cannot walk on his heels, but only on his left foot. What might cause this problem?

In the context of specialized cell structure, which of the following is the closest analogy

Figure 4.PS1.4. Dermatomes.

11.

The Weber–Fechner Law uses what are called “just noticeable differences”, or jnd. Persons were asked to determine the jnd for various sensory modalities. The just noticeable difference was the one that was identified 50% of the time. In this sense, it describes a threshold for sensory perception. The Stevens power law, on the other hand, asked people to rate the intensity of a their perception relative to some standard. The standard stimulus was assigned a number, the modulus, and all perceptions were given a number in proportion to that modulus. Thus, if a subject reported that the stimulus was twice the standard, its assigned number was twice the modulus.

A.

For weight lifting, Stevens reports an exponent of 1.45 in his power law. Given an initial weight of 1 kg, at what mass would the perceived stimulus double?

B.

At what weight would it double again (be four times as great as the 1 kg mass)?

C.

What additional information is needed to compare the Weber–Fechner law to the Stevens power law?

12.

Nerve conduction studies are performed to distinguish among several causes of sensory or motor deficits. These can take multiple forms. Motor nerve conduction studies stimulate motor nerves and record from the muscle innervated by the nerve. Sensory nerve conduction studies stimulate purely sensory portions of a nerve and record from proximal sections of the nerve.

In the F-wave study, supramaximal stimulation of a nerve sends action potentials antidromically towards the ventral horn where a small population of motor neurons backfire towards the muscle, and the second small peak is measured at the site of stimulation. The distance is measured from the site of stimulation to the spinal cord and doubled because the nerve is conducted both ways, and this is divided by the latency, with 1 ms subtracted.

A.

The measured distance between the site of stimulation on the arm and the spinal cord was 85 cm, and the latency in the F-wave study was 30 ms. Calculate the nerve conduction velocity. Is this normal?

B.

The measured distance between the site of stimulation on the calf and the spinal cord was 145 cm, and the latency in the F-wave study was 50 ms. Calculate the nerve conduction velocity. Is this normal?

13.

Botulinum toxin is produced by Clostridium botulinum, a gram-negative bacterium. The toxin actually consists of seven related toxins, types A, B, C1, D, E, F, and G. The toxin is synthesized as a protoxin of 150 kDa, which is proteolytically cleaved to a light (L) and a heavy (H) chain that remain linked by a disulfide bond. Nerve terminals have receptors for both L and H chains. The L-chain is transported across the nerve terminal membrane by endocytosis. These L chains are metalloproteinases—proteases that require metal ions for activity. The L-chain binds Zn2+, and it proteolytically degrades several proteins that make up the SNARE complex.

What do you suppose happens when botulinum toxin is injected near neuromuscular junctions?

From this conclusion, what do you suppose is the basis for botox injections?

14.

The two-point discrimination test generally gives a discrimination of 2–4 mm on the lips and finger pads, 8–15 mm on the palms, and 30–40 mm on the shins or on the back. What are the approximate relative densities of cutaneous touch receptors in these regions?

15.

A muscle strain is a tear in the muscle fiber or associated tendons. The tear or damage to ligaments is called a sprain. It is usually caused by stretching of the muscle while it is contracted through the antagonistic muscles.

A.

Would you expect the Golgi tendon organ to prevent muscle strains?

B.

Given that the distance from the hamstring neuromuscular junction to the spinal cord is 50 cm, what is the expected delay in response of the Golgi tendon organ?

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Toward the Next Generation of Retinal Neuroprosthesis: Visual Computation with Spikes

Zhaofei Yu, ... Tiejun Huang, in Engineering, 2020

2 Visual computation in the neuronal circuit of the retina

Fig. 1 shows a typical setup of the retinal neuronal circuit. Roughly speaking, there are three layers of networks consisting of a few types of neurons. Following the information flow of visual scenes, photoreceptors convert light with a wide spectrum of intensities (from dim to bright) and colors (ranging from red, to green, to blue), into electrical signals that are then modulated by inhibitory horizontal cells. Next, these signals are transferred to excitatory bipolar cells that carry out complex computations. The outputs of bipolar cells are mostly viewed as graded signals; however, recent evidence suggests that bipolar cells can generate fast spiking events [19]. Inhibitory amacrine cells then modulate these outputs in different ways in order to make the computations more efficient, specific, and diverse [20]. At the final stage of the retina, the signals pass on to the ganglion cells for final processing. In the end, the ganglion cells send their spikes to the thalamus and cortex for higher cognition.

In the context of specialized cell structure, which of the following is the closest analogy

Fig. 1. Illustration of the retinal neuronal circuit. Visual scenes are converted by photoreceptors in the first layer, where rods encode the dim light and cones encode color. After being modulated by horizontal cells, the signals are sent to bipolar cells in the second layer. The outputs are sent to the third layer, which consists of amacrine cells and ganglion cells, for further processing. The final signals of the retina are the spikes from the ganglion cells, which are transferred to the cortex. In addition to chemical synapses between cells, massive gap junctions exist between different and the same types of cells (e.g., ganglion–ganglion cells).

Each type of neuron in the retina has a large variation in morphology; for example, it has been suggested that in the mouse retina, there are about 14 types of bipolar cells [21,22], 40 types of amacrine cells [23], and 30 types of ganglion cells [24]. In addition to neurons, a unique feature of any neuronal circuitry is the connections between neurons. Connections between neurons in the retina are typically formed by various types of chemical synapses. However, there are a massive number of electrical synaptic connections, or gap junctions, between different types of cells and between the same type of cells [25–28]. The functional role of these gap junctions remains unclear, however [25]. We hypothesize that gap junctions have the functional role of creating recurrent connections in order to enhance visual computation in the retina; this concept will be discussed in later sections.

In the field of retinal research, most studies are based on the traditional view that neurons in the retina have static RFs that act as spatiotemporal filters to extract local features from visual scenes. We also know that the retina has many levels of complexity in its information processing—from photoreceptors, to bipolar cells, to ganglion cells. In addition, the functional role of the modulation of inhibitory horizontal and amacrine cells is still unclear [20,29]. It is possible that the only relatively well-understood example is the computation of direction selectivity in the retina [30–33].

The retinal ganglion cells are the only output of the retina; however, their activities are tightly coupled and highly interactive with the rest of the retina. These interactions not only make the retinal circuitry complicated in its structure, but also make the underlying computation for visual processing much richer. Therefore, the retina should be considered to be “smarter” than what scientists have believed [34]. These observations lead us to rethink the functional and structural properties of the retina. Given such a complexity of neurons and neuronal circuits in the retina, we propose that the computations of visual scenes that are carried out by the retina should be perceived in a way that goes beyond the view that the retina is similar to a feedforward network that causes information to pass through. Like the cortical cortex, the retina has lateral inhibition and recurrent connections (e.g., gap junctions), which cause the retina to inherit various motifs of neural networks for the specific computations involved in extracting different features of visual scenes, just as visual processing occurs in the visual cortex [35–37].

It should be noted that in comparison with the visual cortex, a detailed understanding of the computation and function of the retina for visual processing has just emerged in recent decades. Today, the retinal computation of visual scenes by means of the retina’s neurons and neuronal circuits is seen as being refined at many different levels; for more detail, see recent reviews on neuroscience advancements on the retina [20,21,25–29,34].

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Machine learning technology in biodiesel research: A review

Mortaza Aghbashlo, ... Su Shiung Lam, in Progress in Energy and Combustion Science, 2021

2 An introduction to artificial neural network

Originated from mathematical neurobiology, the ANN approach and its hybrids could be promising candidates for coping with the nonlinearities and complexities of complicated biological processes like biodiesel systems, even with uncertain, noisy, partial, and missing data patterns. Unlike phenomenological models, the ANN-based modeling methods could map complex biological processes from a set of examples accurately and quickly without requiring the mechanisms and principles behind them. In better words, the ANN-based models are capable of modeling complex dynamic systems with multivariate properties without the need for a proper understanding of the detailed underlying physical mechanisms. On the other hand, the limited transparency of most of these data-driven approaches is the main reason to call the entire portfolio of models “theory-free”. In simple terms, the ANN-based modeling systems are inspired by the human brain's neurological processing ability [80]. Although there are many kinds of ANN models, they all have the same basic principle [81].

The human body's nervous system is formed from billions of interconnected neurons with different types and scales depending on their location in the body [82]. A biological neuron possesses four principal functional parts, i.e., cell body (soma), dendrites, axon, and synapses (Fig. 6). The cell body stores the information of heredity traits and accommodates the plasma for generating the materials required by the neuron [58]. The fiber branches of dendrites receive the input signals from other neurons and flow them towards the cell body. As a connecting line, the axon passes the received signals from the cell body towards synapses (microscopic gaps) located close to the dendrites or cell bodies of neighboring neurons [83]. Proportional to the intensity of the arriving signals to the pre-synaptic membrane of the synapse, the vesicles release chemical neurotransmitters that are transferred through the synaptic gap and post-synaptic membrane into the dendrites of neighboring neurons [84]. The receiving neuron is activated to generate a new electric impulse as the intensity of the received signals reaches its particular excitation threshold [53]. With a similar mechanism, the produced electric signal moves through the next neuron.

In the context of specialized cell structure, which of the following is the closest analogy

Fig. 6. A schematic illustration of the analogy between a biological neuron and an artificial neuron. Adapted from references [67,84,85].

An artificial neural model comprises many simple analog signal processing elements called “neurons” that are most of the time entirely interconnected by unidirectional communication channels called “synapses”. Any artificial neuron can receive input signals, process the received signals, and generate an output signal. Any artificial neuron is connected to at least one other neuron using a weight coefficient, representing the degree of significance of a particular connection to the network [81]. More specifically, in an artificial neuron, the produced signals from other neurons are modeled by input data of [X1, X2,..., Xm] (Fig. 6). The input data are transferred to the artificial neuron while multiplying by their associated synaptic weights (Wkj). It is noteworthy that the synaptic weights might be negative, indicating their inhibitory impact. In addition to input data, a bias input (bk) is considered an additional input signal to the artificial neuron. The intensity of the incoming signals received by the dendrites of the artificial neuron is obtained by the summation of the weighted input data and the bias input as follows [67]:

(1)λk=∑j=1mWkjXj+bk

In continuation, an activation function is applied to model the output electric impulse from the artificial neuron (yk) as bellows:

(2)yk=φ(λk)

The activation function cuts the amplitude of incoming signals into a limited value. The most popular activation functions in artificial neural systems are unity step, identity, piecewise linear, sigmoid, tangent, hyperbolic tangent, and Gaussian [85].

ANN models are categorized either based on their learning mode into supervised/unsupervised or based on their structures into feedforward or feedback recall systems [80]. A general taxonomy of ANN models is presented in Fig. 7. The learning process in the supervised mode is carried out using a set of data patterns, each of which has a distinct input and output. However, a set of data patterns having only input values is used in the training process of unsupervised ANN models. The neural networks with unidirectional information processing procedures are called feedforward ANN models, where information is permitted to transfer only from inputs to outputs. On the contrary, the neural networks with the bidirectional flow are designated as feedback networks where any neuron can attain insights from the former layers while allowing feedback to the following layers [80].

In the context of specialized cell structure, which of the following is the closest analogy

Fig. 7. A general taxonomy of ANN models. Among the neural models presented above, the multi-layer perceptron neural network (MLPNN), extreme learning machine (ELM), and self-organizing map (SOM) approaches have been used so far in biodiesel research.

ANN models obtain their knowledge using various training or optimization algorithms in which numerical weights transferred by synapses are adjusted to minimize the error between real and simulated data. In general, developing ANN models is not straightforward due to many critical steps like data compilation, data processing, topology selection, training and testing the selected model, and applying the developed ANN models for simulation and validation. Fig. 8 portrays the typical main steps involved in the development of ANN models. Among the mentioned steps, data preparation is one of the most essential and crucial stages in ANN modeling of complex systems [86]. This step dramatically affects the success of data mining and knowledge discovery tasks. To address this issue, Yu et al. [87] elaborated a comprehensive data preparation framework to analyze ANN data systematically (Fig. 9). The proposed scheme can improve the training process and simplify the structure of ANN models [87]. Once the model development is finished, the accuracy and reliability of the model need to be verified and proved using various statistical criteria tabulated in Table 2.

In the context of specialized cell structure, which of the following is the closest analogy

Fig. 8. A general flowchart depicting the procedure of ANN model development.

In the context of specialized cell structure, which of the following is the closest analogy

Fig. 9. The integrated data preparation framework to systematically analyze neural network data. The proposed data preparation framework includes three successive phases, i.e., data pre-analysis, data preprocessing, and data post-analysis. In the first phase, data of interest are recognized and compiled. In the second phase, the collected data are examined, analyzed, restructured, and reformed to make them more informative. In the third phase, some data are verified and re-adjusted. Redrawn and modified with permission from Yu et al. [86]. Copyright © 2019 Springer Nature.

Table 2. Statistical criteria used to verify and prove the accuracy and reliability of ML-based techniques [88–101].

Statistical parameterAbbreviation/SymbolFormula
Error E ya,i − yp,i
Sum of error SE ∑i=1n(ya,i−yp,i)
Mean error ME 1n∑i=1n(ya,i−yp,i)
Absolute error AE |ya,i − yp,i|
Sum of absolute error SAE ∑i=1n|ya,i−yp,i|
Mean absolute error MAE 1n∑i=1n|ya,i−yp,i|
Square error SE (yp,i − ya,i)2
Sum of squares error SSE ∑i=1n(yp,i−ya,i)2
Mean square error MSE 1n∑i=1n(yp,i− ya,i)2
Mean absolute deviation MAD 1n∑i=1n|yp,i−y¯p|
Root mean square error RMSE 1n∑i=1n(yp,i −ya,i)2
Standard error of prediction SEP RMSEy¯a×100
Relative percentage error RPE (ya,i−yp,iya,i)×100
Sum of relative percentage error SRPE ∑i=1n(ya,i−yp,iya,i)×100
Mean relative percentage deviation MRPD 1n∑i=1n(ya,i− yp,iya,i)×100 and | 1n∑i=1n(ya,i−y p,iya,i)×100|
Absolute mean square relative error AMSRE |1n∑i=1n(ya ,i−yp,i)2(yp,i)2 |
Percentage of root mean square relative error PRMSRE 1n∑i=1n(ya, i−yp,iya,i)2×100
Absolute percentage error APE |ya,i−yp,iya,i×100|
Sum of absolute percentage error SAPE ∑i=1n|ya,i−yp,iya,i|×100
Mean absolute percentage error (absolute average deviation) MAPE 1n∑i=1n|ya,i− yp,iya,i|×100
Mean absolute percentage error of average data MAPEA 1n∑i=1n|y¯a− y¯py¯p|×100
Linear correlation coefficient RD 1−∑i=1n(yp,i−ya,i)2∑i=1n(ya,i−y¯a)2
Coefficient of determination RD2 1−∑i=1n(yp,i −ya,i)2∑i=1n(y a,i−y¯a)2
Adjusted coefficient of determination Adj.RD2 1−[(1−RD2)×n−1n−k−1]
Pearson correlation coefficient R ∑i=1n(yp,i−y ¯p)×(ya,i−y¯a) [∑i=1n(yp,i−y¯p)2]×[∑i=1n(ya,i−y¯a)2]
Square of Pearson correlation coefficient R2 [∑i=1n(yp,i−y¯p)×(ya,i−y¯ a)]2∑i=1n(yp,i−y¯p)2×∑i=1n(ya,i−y¯a)2
Adjusted Pearson coefficient of determination Adj. R2 1−[(1−R2)×n−1n−k−1]
Regression correlation coefficient RC 1−∑i=1n(yp,i−ya,i)2∑i=1n(y a,i)2
Square of regression correlation coefficient (absolute fraction of variance) RC2 1−∑i=1n(yp,i −ya,i)2∑i=1n(y a,i)2
Relative absolute error RAE ∑i=1n|yp,i−ya ,i|∑i=1n|ya,i−y¯a|
Root relative squared error RRSE ∑i=1n(yp,i−y a,i)2∑i=1n(ya,i −y¯a)2
Standard deviation of error STD ∑i=1n[(ya,i−yp,i)−ME]2n−1
Standard error SE STDn
Normalized mean squared error NMSE MSESTD2
Kling Gupta efficiency KGE 1−(R−1)2+(y¯py¯a−1)2+(STDpSTDa−1)2
Pearson's chi-square test χ2 ∑i=1n(ya,i−yp,i)2yp,i

k: Number of input variables; n: Number of data points; y¯a: Mean of actual output; ya,i: Actual output; y¯p : Mean of predicted output; yp,i: Predicted output

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Cypermethrin induced toxicities in fish and adverse health outcomes: Its prevention and control measure adaptation

Sana Ullah, ... Hafiz M.N. Iqbal, in Journal of Environmental Management, 2018

3 Cypermethrin (CYP) – a model pesticide

Pyrethroids are divided into two types, i.e., (1) type I (allethrin, tetramethrin, permethrin, resmethrin, and bioresmethrin) and (2) type II (cyfluthrin, deltamethrin, cyphenothrin and CYP), based on their chemical structure. CYP is a widely used, efficient and readily available pyrethroid, derived from pyrethrin, itself extracted/derived from Chrysanthemum cinerariaefolium (Soderlund et al., 2002; Ahmad et al., 2009). It is employed in almost every type of agricultural setups, gardens, buildings, and forestry for insect's prevention but most often it is used to protect cotton and soybean from pests as well as repelling and controlling mosquitoes – malarial parasites carriers (Ullah, 2015). However, its illegal, unsystematic and, imprudent misuses lead to severe harmful effects on the environment in general and aquatic organisms specifically. Research has shown that prolong CYP exposure can lead to chronic and persistent neurotoxic/neurologic effects, failure of reproductive process mostly result in abortion, immunosuppression, teratogenic effects, induction of oxidative stress through reactive oxygen species (ROS) generation, and inhibition of antioxidant enzymes system leading to oxidative damage (Bretveld et al., 2008; Ullah et al., 2014a, 2016; Ullah, 2015).

3.1 Mechanisms of action (MoA) of Pyrethroids/CYP

Fig. 1 illustrates a schematic mechanism of action of CYP. CYP leads to the cyanohydrin formation, consequently decomposed to cyanides and aldehydes, ultimately resulting in the production of ROS (Wielgomas and Krechniak, 2007). ROS induce lipid peroxidation (LPO) and elevate Ca++ concentration, leading to cytotoxicity and genotoxicity in exposed organisms (Ullah, 2015). The adverse effects of pyrethroids/CYP are mainly due to their neurotoxic actions, linked to the inhibition of AChE resulting in pathological retention of ACh in synaptic gaps (Idris et al., 2012). CYP mediates hyperexcitability via interaction with Na++ channels, inducing neurotoxic effects (Ray, 2001). Proteomically, CYP mediate mitochondrial dysfunction by changing mitochondrial proteome, causing apoptosis and induces oxidative stress, consequently lead to nigrostriatal dopaminergic neurodegeneration (Agrawal et al., 2015).

In the context of specialized cell structure, which of the following is the closest analogy

Fig. 1. The mechanism of action (MoA) of Cypermethrin. 1 - CYP interrupts Na+ channel gate closing leading to multiple nerve impulses instead of the single one, which in turn leads to the release of the acetylcholine neurotransmitters and stimulation of other nerves. 2 - CYP has a direct effect on calcium channels leading to increased concentration of cytosolic calcium. 3 - CYP leading to genotoxicity and cytotoxicity. 4 - Inhibits GABA receptor thus causing convulsions and excitability. 5 - CYP inhibits AChE, which results in ACh pathological retention in synaptic gaps. 6 - Metabolism of CYP leads to cyanohydrins further to aldehydes and cyanides. 7 - CYP resulted aldehydes and cyanides induce ROS. 8 - CYP affects adenosine triphosphatase.

3.2 CYP-mediated toxicities in fish

The presence of pesticides in sub-lethal concentrations leads to different toxic effects in fish. Fig. 2 illustrates a schematic representation of Cypermethrin (CYP) as a model pesticide induced toxic effects in fish. CYP displayed developmental toxicity in H. fossilis (disturbing reproductive cycle) (Singh and Singh, 2008), and Odontesthes bonariensis (effected growth) (Carriquiriborde et al., 2009), etc. CYP exposure led to oxidative stress in the form of elevated malondialdehyde (MDA), Catalase (CAT) and superoxide dismutase (SOD) in D. rerio (Shi et al., 2011), altered CAT, peroxidase (POD), LPO and Glutathione Reductase (GR) in different tissues of T. putiora (Ullah et al., 2014b), elevated level of LPO and reduced CAT, SOD and reduced glutathione in the gills of C. striatus (CSG), C. catla (ICG) and L. rohita (LRG) (Taju et al., 2014), increased MDA, ROS, SOD, CAT and protein carbonyls in the gills of Procambarus clarkia (Wei and Yang, 2015), increased activities of GSH, MDA and glutathione peroxidase (GSH-Px) while reduced activity of CAT in O. mykiss (Kutluyer et al., 2016), and increased cortisol level, GR in the early life stages of L. rohita (Dawar et al., 2016). The neurotoxicity and other major consequences of CYP are presented in Fig. 3. Table 4 depicts some of the toxic effects of CYP-induced in different species of fish.

In the context of specialized cell structure, which of the following is the closest analogy

Fig. 2. Cypermethrin induced toxic effects in fish.

In the context of specialized cell structure, which of the following is the closest analogy

Fig. 3. The neurotoxicity and other major consequences of CYP.

Table 4. Toxic effects of CYP in fish.

S. No.Kind of fishChanges noticedReference
1 Jenynsia multidentata Changes in swimming behaviour and in the activity of acetylcholinesterase Bonansea et al., 2016
2 Labeo rohita Developmental deformities, changes in antioxidant enzymes in developmental stage and survival Dawar et al., 2016
3 Jenynsia multidentata Disturbance in swimming behaviour Bonansea et al., 2016
4 Oreochromis niloticus Changes in behaviour Haque and Mondal, 2016
5 Pangasianodon hypophthalmus Alterations in the histoarchitecture of liver and gills Monir et al., 2016a
6 Oncorhynchus mykiss Oxidative stress induction and quality change in spermatozoa Kutluyer et al., 2016
7 Heteropneustes fossilis Alterations in the histoarchitecture of ovary Monir et al., 2016b
8 Procambarus clarkii Protein carbonyls, MDA, CAT, SOD and ROS increased in gills Wei and Yang, 2015
9 Tor putitora Changes in hematology and histopathological damage Ullah et al., 2015
10 Labeo rohita DNA damage, changes in the activities of protein metabolic enzymes Ullah, 2015
11 Tor putitora Vertical position, lose balance and equilibrium, sluggishness, motionlessness, and increased air gulping, jumping Ullah, 2014
12 Anabas testudineus Changes in surface structure of gills, scales and erythrocytes Babu et al., 2014
13 Catla Changes in Biochemical and haematological parameters Kannan et al., 2014
14 Rhamdia quelen Clinical, haemathological and biochemical changes Montanha et al., 2014
15 Tor putitora Altered antioxidant enzymes CAT, POD, GR, LPO in brain, muscles, liver and gills Ullah, 2014
16 Rhamdia quelen Spiral movement, swimming alterations such as upright swimming, sudden swimming and balance loss Montanha et al., 2014
17 Prochilodus lineatus Alterations in hepatic enzymes' activities Loteste et al., 2013
18 Cyprinus carpio Haematological changes Masud and Singh, 2013
19 Prochilodus lineatus DNA damage induction in gill cells Poletta et al., 2013
20 Catla Changes in biochemical and hematological parameters Vani et al., 2012
21 Clarias gariepinus Hematological alterations Akinrotimi et al., 2012
22 Channa punctata Cytogenetic and oxidative stress Ansari et al., 2011
23 Danio rerio Apoptosis and Immunotoxicity in the embryos Jin et al., 2011a
24 Clarias batrachus and Channa punctatus Changes in Nitrogen metabolism Kumar et al., 2011
25 Danio rerio Induction of Hepatic oxidative stress and DNA damage Jin et al., 2011b
26 Oeochromis niloticus Changes in serum biochemistry Fırat et al., 2011
27 Danio rerio Oedema of pericardium and yolk sac Xu et al., 2010
28 Odontesthes bonariensis Altered growth and survival rates Carriquiriborde et al., 2009
29 Clarias batrachus Alterations in ATPase and Glycogen phosphorylation Begum, 2009
30 Labeo rohita Loss of equilibrium, erratic and irregular swimming, hyper excitability and sinks to the bottom Marigoudar et al., 2009
31 Oreochromis niloticus Biochemical and histopathological changes Korkmaz et al., 2009
32 Heteropneustes fossilis Disturbance in the action of spermatogenic cells and follicular wall Singh and Singh, 2008
33 Clarias gariepinus Histopathological effects Ayoola and Ajani, 2008
34 Clarias batrachus Biochemical changes Begum, 2007
35 Jundiá Rhamdia quelen Asphyxiation and hyper-excitability, operculum and mouth become wider Borges et al., 2007
36 Prochilodus lineatus Changes in hematology Parma et al., 2007

3.3 Pesticides/CYP exposure and associated human vulnerabilities

Pesticides lead either directly or indirectly to humans via different routes. The repeated exposure to pesticides is even more dangerous because of their capability to bind with fats, consequently leading to bioaccumulation in the body over time. A study revealed that α-CYP in low dose leads to some metabolic and redox alterations, which therefore results in impairment of maternal physiology and fetal metabolism (Hocine et al., 2016). Fetus/infants are more vulnerable to pesticides and adversely affected by pesticide exposure in the womb (Huen et al., 2012). Pesticidal exposure is also linked with certain types of cancers related to bladder, rectum, kidney, pancreas, lung, colon, stomach, brain, ovary, breast, prostate, testicular, multiple myeloma, and non-Hodgkin's lymphoma (Alavanja et al., 2013). Pesticides exposure disturbs the function of various hormones such as sex/reproductive hormones (Kjeldsen et al., 2013), and thyroid hormones (Lacasaña et al., 2010; Freire et al., 2013). CYP-induced androgen receptor (AR) antagonist by repressing the interaction between AR-SRC-1 (steroid receptor coactivator1) and AR-SMRT (retinoid and thyroid hormone receptors) arbitrated by IL-6 (Wang et al., 2016). Exposure to CYP resulted in immune cell death, apoptosis and inhibited cell cycle mediated by JNK/ERK pathways (ROS-regulated) (Huang et al., 2016). CYP exposure also led to inflamed kidneys and liver, and genotoxicity (Vardavas et al., 2016). Certain pesticides have been observed to be severe neurodevelopmental toxicants (Bjørling-Poulsen et al., 2008; Soderlund, 2012).

3.4 Pesticides exposure and related disorders/diseases

Parkinson disease (PD) is a common neurodegenerative disorder, associated with neuron loss in the midbrain (Nabi et al., 2014). The associated factors for PD including a genetic factor, age, and gender are covered up by pesticides exposure (Wang et al., 2014). Some studies are revealing a significant association of PD with pesticides exposure (Nabi et al., 2014). There is a considerable literature available depicting the genotoxic/DNA damaging potential of different pesticides in individuals exposed to pesticides including farmers, agricultural workers, pesticides dealers and greenhouse workers, etc. (Ergene et al., 2007; Salazar-Arredondo et al., 2008; Alavanja et al., 2013). The observed genotoxic effects were evaluated through different tests/assays such as micronuclei/or comet assay. The results of various studies around the globe were variously concluded because of specific differences such as exposure period, exposure level, cocktail/mixture of pesticides, geographical characters, meteorological conditions, and types of pesticides (Martínez-Valenzuela et al., 2009). The genotoxic effects are observed regarding nuclear anomalies, sister chromatid exchanges, micronuclei, comet formation, chromosomal aberration (multipolar anaphase or telophase), strand breaks, alkali labile sites presences, C-mitosis, sticky chromosomes, anaphase or telophase bridge, laggard and genetic damage index, etc. (Ergene et al., 2007; Martínez-Valenzuela et al., 2009; Ullah et al., 2017).

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Conducting polymer-based electrochemical biosensors for neurotransmitters: A review

Jong-Min Moon, ... Yoon-Bo Shim, in Biosensors and Bioelectronics, 2018

2 Neurotransmitter sensors

Neurotransmitters (NTs) are endogenous chemicals that are involved in the transmission of signals from one neuron to another or between non-neuronal body cells across chemical synapses exchanging information throughout the brain and body (Patestas and Gartner, 2006). Produced by glands such as the pituitary, pineal and adrenal glands, NTs are stored in vesicles clustered at neuronal terminals. An action potential at a synapse stimulates the release of NTs, which cross the synaptic gap to reach the receptor site of the other neuron or cell, where they are reabsorbed. A new action potential is then created at the axon terminal of the next neuron followed by a similar release of NTs subsequently, communicating information to another adjacent neuron. Thus, a complex cascade is initiated via neurons that eventually elicits a biological response. Since the discovery of the first neurotransmitter in 1921, more than one hundred chemical messengers have been identified, which are involved in synaptic transmission (Yamada et al., 1998). NTs can be classified according to their 1) molecular structure; 2) mode of action either direct or as neuromodulator; and 3) physiological function either excitatory or inhibitory. However, in this review, the classification is based on their chemical structure, therefore they are divided into four groups: amino acids primarily (glutamic acid, aspartic acid, and tyrosine), biogenic amines (epinephrine, nor-epinephrine, dopamine, serotonin and histamine), acetyl choline (acetyl-choline and choline), and soluble gases (such as nitric oxide and hydrogen sulfide). Various aspects of these NTs are summarized in Table 1. Moreover, NTs play a key role in the functioning of the brain and control various behavioral and physiological conditions that affect daily life, for example, learning, memory, sleeping, consciousness, mood and the regulation of muscle tone, heart rate and blood pressure (Tomkins and Sellers, 2001; Dunn and Dishman, 1991; Freed and Yamamoto, 1985). Variations in the production, secretion, uptake and/or metabolism of these chemicals may lead to various mental and physical disorders, such as Huntington’s, Alzheimer’s, Parkinson’s diseases, schizophrenia, epilepsy, thyroid hormone deficiency, glaucoma, congestive heart failure, and different types of cancers. Hence, timely and accurate determination of NTs level in various physiological media (such as urine, plasma, and cerebral fluids) is imperative for effective diagnosis, monitoring of the disease, therapeutic interventions as well as to understand the role of these chemicals in brain functions. Various analytical tools has been reported for the quantification of NTs in biological matrices. These include mass spectroscopy, fluorimetry, chemiluminescence, chromatography, and capillary electrophoresis (Zhang et al., 2007; Santos-Fandila et al., 2013; De Benedetto et al., 2014; Wang et al., 2012; Li et al., 2011; Zhao and Suo, 2008; Lapainis et al., 2009). Most of them are complex, expensive, require tedious procedures, and suffer from poor sensitivity and selectivity. By contrast, electrochemical methods are known to provide low-cost, simple, sensitive, fast response time and selective determination of various biological species. The advent of chemically modified electrodes brought rapid improvements in the field of electroanalysis, meeting the higher demands for sensitivity and selectivity (Durst, 1997). The distinct property of a chemically modified electrode is that the specific material immobilized on the electrode surface conveys its chemical, electrochemical, and electrical characteristics as well as other desirable properties. Numerous materials, such as metal and metal oxide nanoparticles, carbon nanotubes, biomolecules and CPs, have been used for electrode modification (Adams, 1969). Among these, CPs and composites have attracted considerable attention in recent years.

Table 1. Classification of neurotransmitters, associated diseases and chemical structures.

CategoryAnalystsAssociated diseasesChemical structure
Amino acidGlutamic acid Seizures, neural degeneration, lethargy and cognitive dysfunction
Aspartic acid Stroke, chronic fatigue syndrome, depression, Huntington’s disease
Tyrosine Parkinson’s disease, behavioral deficit
Biogenic aminesNor-epinephrine Schizophrenia, depression, ADD (Attention deficit disorder)
Epinephrine Depression, Addison’s disease, palpitation, high blood pressure
Dopamine Tourette’s disease, schizophrenia, psychosis, depression, Parkinson’s disease, ADD
Serotonin Depression, anxiety disorders, especially obsessive-compulsive disorder
Histamine Immune system disorder, schizophrenia, convulsion, seizure, and Parkinson’s disease
Acetyl cholineAcetyl choline, choline Depression, Alzheimer’s disease, dementia
Soluble gasesNitric oxide Huntington’s, Alzheimer’s Parkinson’s disease, vascular stroke.
Hydrogen sulfide Down syndrome, Chronic obstructive pulmonary disease

The first electrochemical preparation and characterization of an organic π-conjugated polymer (polyaniline) was reported by Letheby in 1862 (Letheby, 1862). After that, the conductivity of polyacetylene was studied and found to be enhanced 10-folds with the use of iodine vapors (Shirakawa et al., 1977; Basescu et al., 1987; Chiang et al., 1977). Since then, various types of CPs have been synthesized and applied in various fields. Due to the groundbreaking work of Heeger, MacDiarmid, and Shirakawa on CPs, these researchers were jointly awarded with the Nobel Prize in Chemistry in 2000. Early research on CPs was reported by (Diaz et al., 1981) who proposed the original mechanism of polypyrrole formation. Similarly, Park’s group extensively studied the electrochemistry of CPs; he reported the autocatalytic growth mechanism of polyaniline along with its growth kinetics on the electrode surface (Shim and Park, 1989; Shim et al., 1990; Stilwell and Park, 1988, 1989). CPs have received considerable attention in recent years due to their extensive potential applications in the fields of batteries, sensors, solar cells, electrochromic devices, etc. (Park, 1997; Skotheim et al., 2006; Rahman et al., 2008a; Kim et al., 2012; Beaujuge and Reynolds, 2010). One of the most practical applications of CPs is in the fabrication of modified electrodes for developing chemical sensors and biosensors. CPs are highly sensitive with even slight modulations at their surface leading to changes in their electrochemical activity. CPs are commonly used to modify electrode surfaces; however, polypyrrole (PPy) and polyaniline (PANI) are not highly stable in air (Shim et al., 1990; Park et al., 1993) than polythiophene (Arbizzani et al., 1997) and polyterthiophene derivatives (Blanchared et al., 2006; Heffries-Ml and McCullough, 2006, Lee and Shim, 2001). The electrical conductivity of these polymers can be controlled over a wide range by proper doping/de-doping with suitable dopants (Heeger et al., 1988; Lee et al., 1992). Additionally, CP-modified electrodes display wide potential windows thus, they show prospect to catalyze electrochemical reactions that have poor selectivity and high over-potential. Despite these unique electrical properties, biosensors prepared with pure CPs are somewhat limited of low sensitivity and selectivity as well as poor electron transfer between a target molecule and the electrode surface. Thus, functionalized CPs and their nanocomposites with metal nanoparticles (Rahman et al., 2008b; Kim et al., 2009; Naveen et al., 2016; Noh and Shim, 2016), carbon (Shrivastava et al., 2016), and various organic materials (Kwon et al., 2006), which offer high electrical conductivity, sensitivity, effective surface area, and facile electron transfer. In addition, CPs and their composites are considered as biocompatible materials in biological system due to their less/nontoxic effect, which make them an ideal choice for biosensor fabrication. Various types of polymers and composites are summarized in Fig. 1. Over the past few decades, several electrochemical biosensors based on CP nanocomposites has been published in numerous journals with major contribution in electroanalytical and analytical chemistry aiming towards the determination of a wide range of compounds. Considering the abundant and highly scattered information in the literature, it has become challenging to a broad overview of this research area with a focus on the electroanalysis of NTs. The present review attempts to outline state-of-the-art methodologies and recent advancements made in the last few years regarding the use of CPs and their composites for the detection and determination of various important neurotransmitters (Table 2).

In the context of specialized cell structure, which of the following is the closest analogy

Fig. 1. Schematic representation of various types of conducting polymers and composite materials.

Table 2. A comparison of the validation parameters of conducting polymer-based sensors for the detection of various neurotransmitters.

NeurotransmitterElectrodeMethodLinear Range (in µM)LOD (in µM)MatrixRef
GlutamateGluOx/pTTCA/Pt Amperometry 0.2-100 0.1 Rat brain Rahman et al., 2005, Lee et al., 2008
GluOx-BSA/Nafion/OPPy/Pt micro electrodeAmperometry upto 630 2.1 Tseng and Monbouquette, 2012
GluOx/functionalized PPD/microneedle array electrodeAmperometry upto140 3.0 Human serum Windmiller et al., 2011
PPD/GluOx/PEI/Pt electrodeAmperometry 5.0-150 0.02 Mcmahon et al., 2007
PU/GluOx/MWCNT/PPy/Pt electrodeAmperometry 0.3-500 0.3 Ammam and Fransaer, 2010
GluOx/PPD/Pt electrodeAmperometry 2.0-800 0.5 Rat brain nerve terminals Soldatkin et al., 2015
GluOx/PEDOT:PSS/Pt NPs/OECDAmperometry 0.9-14 0.5 Kergoat et al., 2014
AspartateMIP/oPPy/Au electrode QCM Syritski et al., 2008
MI-PI3AA/ MWCNTs-PG electrodeDPASV 0.15-7.4 0.025 Human serum Prasad and Pandey, 2013
0.15-8.640.016 Pharmaceutical formulations
TyrosineMSNs/CPE DPV 0.5-600 0.15 Artificial urine Tashkhourian et al., 2016
MWCNT/GCSWV 2.0-500 0.4 Xu and Wang, 2005
p-APT/rGO/GCDPV 50-600 5.97 Human urine Noh et al., 2014
MIPPy /GCDPV 0.01-1 and 2-8 0.004 Human urine Saumya et al., 2011
EpinephrinePPy/AuNPs/SWCNTs/Au DPV 0.004-0.10 0.002 Injections Lu et al., 2011
Human serum, plasma, and urine
Electrode
SDBS-doped polypyrrole /MWCNTDPV 0.1-8.0 and 0.04 Injection Shahrokhian and Saberi, 2011
10-100
Cu2+-PANI-Nano-ZSM-5/GCDPV 0.01-600 0.004 Injection Kaur and Srivastava, 2015a
Au-MWCNT-PANI-TiO2 and Au-MWCNT-PANI-RuO2CV 4.9-76.9 0.16 and 0.18 Pharmaceutical samples Tsele et al., 2017
Polythionine/AuNPs/GCDPV 5.5-218 1.6 Serum Huang et al., 2016
NorepinephrinepAcrylic acid/PAA Amperometry Alvarez et al., 2012
microchannel
RGD peptide on inkjet-printed PANiAmperometry 0.002 0.002-1 PC12 cells Oh et al., 2013
p-AMT/GCAmperometry 0.01-100 0.00002 Human plasma Revin and John, 2012
PDAN/Pt electrodeDPV 9.90-90.9 1.82 Pharmaceutical Guedes et al., 2011
Formulation
DopamineF3GA/PDAN/GC LSV 5.0-100 0.1 Human urine Abdelwahab et al., 2009
GO/AuNPs/pDAN-EDTAAmperometry 0.01-1 0.005 PC12 cells Mir et al., 2015
polyDAN-RB4/GCDPV 0.1-1500 0.061 Human serum and urine Chandra et al., 2013
PEDOT:PSS/ITODPV 1-50 6.84 Pal et al., 2017
Nf/Cu-MPS/GCSWV 0.08-5.0 0.05 Won et al., 2005
GR/pAHWSA/SPCESWV 0.05-100 0.002 Human urine and blood Raj et al., 2017
PEDOT/nafion/microelectrodeCV Rat brain Vreeland et al., 2015
PEDOT/RGO/GCAmperometry 0.1 to 175 0.039 Wang et al., 2014
PEDOT/CNT/CPEDPV 0.1 to 20 0.02 Xu et al., 2013
PEDOT-Aunano/Au in presence of SDSLSV 0.5 to 20 0.0004 and 0.002 Human urine Atta et al., 2012
25 to 140
PNMPy, PNCPy, PEDOT/GCCV Fabregat et al., 2014a, 2014b
PEDOT:PSS/ITOAmperometry 10-900 1 Scavetta et al., 2014
PEDOT/ssDNA/CPEAmperometry 0.25-66.5 0.074 Xu et al., 2015
PEDOT/rGO/aptamerDPV 0.000001 0.000000078 Human serum Wang et al., 2015a, 2015b
-0.160
GO-PEDOT/GCCV 1.0-40 0.083 Weaver et al., 2014
PEDOT/DES/GCDPV 5-180 1.3 Prathish et al., 2016
PEDOT/Pt electrodeCV 0.5-25 0.061 Human urine Atta et al., 2011a
in presence of SDS30-100 0.086
PEDOT:tosylate microelectrodeCV PC12 Larsen and Taboryski, 2012
PEDOT/IL/GCAmperometry 0.2-312 0.051 Sheng et al., 2015
EDOT/PNMPy/PEDOT/GCCV 500-2000 Fabregat et al., 2014a, 2014b
(Au/PEDOT–Pt–Ag/AgCl)DPV 0.2–300 0.1 Belaidi et al., 2015
Pt-CPPy microelectrode arrayFET 0.0000001-0.001 Lee et al., 2015
PNMPy,PNCPy/AuNP/GCCV 100-10000 Fabregat et al., 2011
PPy/CNTs-MIPs/GCDPV 0.0000005-5.0 0.00001 Qian et al., 2014a
MIPs/MWNTs/GCDPV 0.63-100 0.06 Kan et al., 2012
OPPy–MSA–MWCNTs/Au electrodeDPV 0.001-2.87 0.0004 Human serum Su et al., 2012
PPy/graphene/MEAAmperometry 0.8-10 0.004 PC12 Wang et al., 2015a, 2015b
Py/PSS electrodeAmperometry PC12 Sasso et al., 2013
Au NPs/OPPy NT arrays electrodeSWV 0.025-2.5 0.01 Lin, 2015
nano-Cu/PPy/GCDPV 0.001-0.1 0.00085 Injection, human urine Ulubay and Dursun, 2010
Ppy/FCN/CPEDPV 100-1200 15.1 Raoof et al., 2005
tyrosinase–SWNTs–PpyAmperometry 5-50 5 Min and Yoo, 2009
[email protected]/GSDPV 0.0001-5 0.00001829 Qian et al., 2014b
ET-SDBS-NPPy/ERGOSWV 0.1-100 0.02 Human serum Arulraj et al., 2016
Lac/PPy/MWCNT/PtDPV 0.50-4.75 0.14 Human urine Cesarino et al., 2013
aptamer/GR–PANI/GCSWV 0.000007-0.09 0.000002 Human serum Liu et al., 2012
Ag/PANI CompositeCV Gao et al., 2009
[email protected]DPV 10-1700 5 Human serum Yang et al., 2012
PANI/Au composite hollow spheresCV 1000-10000 Feng et al.,2006
LbLdeposited PANI–AuNDPV 7-148 3 Stoyanova et al., 2011
PANI/PDDMAC/AuNpsCV 50 Prakash et al., 2009
TS-PANI/GCAmperometry 10-300 0.7 Jin et al., 2010
P3MT/γ-CDSWV 0.5-50 0.2 Bouchta et al., 2005
Nafion/SWNTs/poly(3-methylthiophene)DPV 0.020–0.10, 0.10–1.0, 0.005 Human blood serum, Wang et al., 2006
injection
1.0–6.0
Pt/PMT(BE)/PdDPV 0.05–1 0.008 Urine, Atta and El-Kady, 2010
human blood serum
PIn5COOH/TYRAmperometry 0.5–20 Maciejewska et al., 2011
MBIPDPV 0.02-7 0.006 Urine and plasma Rezaei et al., 2015
AuNPs-PTAP/GCDPV 0.15–1.5 0.017 Human serum, Khudaish et al., 2016
pharmaceutical drug
Pl-LEU/DNA compositeDPV 0.1–100.0 0.04 Urine Zheng et al., 2013
AuNP/PANAmperometry 1-100 0.91 Chu et al., 2015
Nafion-CNT- ABTS/ITODPV 1.87–20.00 1.75 Human serum Chih and Yang, 2013
Pty/GCLSSV 1-7 0.142 Serum Khudaish et al.,2012
PILs/PPy/GODPV 4–18 0.073 Mao et al.,2015
PPyox-PTSA/Ag-NP/PtDPV 0.001-0.12 0.00058 Serum Saha et al., 2014
PMR/CPECV 0.01-0.1, 0.005 Pharmaceutical samples Zhou et al.,2011
0.1-1000
PNMPy/PSCV 10000-20000 1.5 Marti et al., 2010
PPy/eRGODPV 0.1–150 0.023 Human serum Si et al.,2011
PEDOT/GO/CFECV 0.5-10 0.22 Rat dorsal striatum Taylor et al., 2017
hDRD1-MCPEDOT NF/FETAmperometry 0.0001-0.001 Park et al., 2016
SerotoninCD/PNAANI/CNT DPV 4-200 0.2 Bovine assayed multi-sera Abbaspour and Noori,2011
polymelamine/EPPGSSWV 0.1-100 0.03 Serum and urine Gupta and Goyal, 2014
[email protected]DPV 0.2-10 0.0113 Human blood serum Xue et al., 2014
PEDOT: PSS/TPyP-3IP/FTOCV 0-224 0.23 Song et al., 2014
PEDOT/Pt in SDSLSV 0.05-10 0.048 Human urine Atta et al., 2011b
20-1000.071
[email protected]/GSPESWV 0.1-15 0.03 Human serum Tertiș et al., 2017
PEDOTNTs/rGO/AgNPs/GCDPV 0.001-500 0.0001 Bovine assayed multi-sera Sadanandhan et al., 2017
HistamineMIP on B : NCD :O electrode EIS Ratautaita et al., 2014
MWCNTs/p-(AHNSA)/GCDPV 0.1-100 0.0762 Fish muscle Geto et al., 2014
lignin modified GCSWV 5-200 0.28 Wine and human urine Degefu et al., 2014
AcetylcholinepAu/pTTBA/ChOx-Hydrazine Amperometry 0.0007-1500 0.0006 Leukemic T-cells Akhtar et al., 2017
AchE-ChO/Fe2O3/rGO/PEDOT/FTOAmperometry 0.004-800 0.004 Human serum Chauhan et al., 2017
PEDOT/PSS/gold wireAmperometry 100-1000000 5.69 Rat brain He et al., 2016
poly(SNS-NH2)/AChE–ChOAmperometry 120-10000 111 Pesticide Kanik et al., 2013
Naf–FCNTs/AChE–ChO (10:1)/PoPD/CFElipAmperometry 0.045 Khan and Ab Ghani,2012
ChO/poly(TBT6–NH2)-graphiteAmperometry 100-10000 16.8 Pesticide Kanik et al.,2012
AChE/PANI-Nano-ZSM-5/GCAmperometry 1-1000 0.03 Pesticide Kaur and Srivastava, 2015b
Pt/PPYox/P2NAP/ChO–AChEAmperometry 0.1 Guerrieri et al., 2006
Pt/PPYox/P2NAP/ChO
Polypyrrole-Amperometry 0.01-0.1 0.005 Synthetic blood Aynaci et al., 2014
polyvinylsulphonate
film0.1-1
MIP(PANI/MWCNT)Potentiometry 34.5 Synthetic serum Sacramento et al., 2017
Nitric oxideCytc /poly-TTCA Amperometry 2.4–55.0 0.013 Rat brain Koh et al., 2008
Nafion/Cytc /poly-TTCA/Pt microelectrodeAmperometry 0 – 55.0 0.013 Rat brain Lee et al., 2010
CAS/SOD/MP/MWCNT-PTTCA/AuNPAmperometry 1.0-40 0.0043 Liver and cultured cells Abdelwahab et al., 2010
anti-iNOS/AuNP(TTBA)Amperometry 0.001-0.02 0.0002 Cultured cells Koh et al., 2011
p-EDA- MWNTs/GCAmperometry 0.095-11 0.095 Drug Wang et al., 2013
GC/AuPs/PPBZAmperometry 20-140 0.0037 Goat and chicken Liver Mohan et al., 2014
Hydrogen sulfideSPE-Pt electrode Amperometry 0-100 ppm 1 ppm Yourong et al., 2001
NASICON and Pr6O11-Potentiometric 5-50 ppm Liang et al.,2007
doped SnO2
PANI nanofibers dopes with10 ppm Virji et al., 175
Zn, Cd, Cu
PANI nanowires-AuNPSChemiresistive sensor 0.1-500 ppb 0.1 ppb Shirsat et al.,2009
PANI-CuCl2-Carbon IDEChemiresistive sensor 10-100 ppmv 2.5 ppmv Crowley et al., 2010
HRP–SAM–Au electrodeAmperometry 0.5–12.7 0.3 Mountain stream water Yang et al., 2004

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URL: https://www.sciencedirect.com/science/article/pii/S0956566317307984

What term is used to describe a specialized cell?

What term is used to describe a specialized cell that makes up the nervous system and receives and sends messages within that system? Neuron.

What is a function of the axon in a nerve cell in the context of specialized cell structure?

Which of the following is a function of the axon in a nerve cell in the context of specialized cell structure? It carries information away from the cell body toward other cells.

Which of the following is true about the myelin sheath that cover the axons of nerve cells?

The following statement is true: c) It is necessary for saltatory conduction. Myelin wraps around the axon of a neuron. It serves to increase the speed of conduction by insulating the axon.

What is the name of the large bundle of axons that connects the two halves of the brain?

The hemispheres are connected by a large C-shaped fiber bundle, the corpus callosum, which carries information between the two hemispheres.